STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
myo5aMyosin VAa; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1845 aa)    
Predicted Functional Partners:
LOC108249368
RAB11a, member RAS oncogene family.
   
 0.661
LOC108230830
Uncharacterized protein.
   
 0.659
LOC108230746
RAB11B, member RAS oncogene family, b.
   
 0.659
LOC108239416
Uncharacterized protein.
   
 0.659
LOC108248885
RAB11a, member RAS oncogene family, like.
   
 0.659
exoc4
Exocyst complex component 4.
    
 0.599
LOC108228616
Calmodulin 2a (phosphorylase kinase, delta); Belongs to the calmodulin family.
    
 0.598
calm1
Calmodulin 3a (phosphorylase kinase, delta); Belongs to the calmodulin family.
    
 0.598
LOC108241768
Calmodulin.
    
 0.598
LOC108240935
Calmodulin.
    
 0.598
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.