STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
myo3bMyosin IIIB; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1377 aa)    
Predicted Functional Partners:
LOC108249344
Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.
   
 
0.786
CASK
Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.
   
 
0.786
espnl
Espin like a.
    
 0.756
espn
Espin.
    
 0.756
nlrc3
NLR family, CARD domain containing 3.
      
 0.636
LOC108234899
Myosin, light chain 2b, regulatory, cardiac, slow.
    
 0.635
MYL2
Myosin light chain 2.
    
 0.607
LOC108245622
Whirlin b.
   
 0.582
ENSKMAP00000019777
Whirlin a.
   
 0.582
ripk4
Receptor-interacting serine-threonine kinase 4.
    
0.575
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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