STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
znf276Zinc finger protein 276. (655 aa)    
Predicted Functional Partners:
srbd1
S1 RNA binding domain 1.
    
 
 0.636
dclre1b
DNA cross-link repair 1B.
    
 
 0.636
klf12
Kruppel-like factor 12b.
    
 
 0.632
naif1
Nuclear apoptosis inducing factor 1.
      
 0.624
vps9d1
VPS9 domain containing 1.
      
 0.583
ccnk
Cyclin K; Belongs to the cyclin family.
    
 0.582
def8
Differentially expressed in FDCP 8 homolog.
      
 0.563
nr2c2
Nuclear receptor subfamily 2, group C, member 2.
    
 0.550
nr2c1
Nuclear receptor subfamily 2, group C, member 1.
    
 0.540
rnf166
Ring finger protein 166.
   
 0.509
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.