STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108237984Cytoplasmic FMR1-interacting protein; Belongs to the CYFIP family. (1252 aa)    
Predicted Functional Partners:
BRK1
BRICK1 subunit of SCAR/WAVE actin nucleating complex.
    
 0.998
nckap1
NCK-associated protein 1.
   
 0.993
nckap1l
NCK associated protein 1 like.
   
 0.993
wasf1
WASP family member 1.
    
 0.985
LOC108238304
Abl-interactor 1b.
   
 0.983
ABI1
Abl-interactor 1a.
   
 0.983
fmr1
Fragile X mental retardation 1.
    
 0.979
fxr1
Fragile X mental retardation, autosomal homolog 1.
    
 0.978
wasf3
WASP family member 3b.
    
 0.966
LOC108246483
Zgc:109889.
    
 0.966
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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