STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
unc93aUnc-93 homolog A. (464 aa)    
Predicted Functional Partners:
brca1
Uncharacterized protein.
   
 
 0.703
mfsd10
Major facilitator superfamily domain containing 10.
      
 0.599
LOC108234099
Glutathione S-transferase.
      
 0.595
LOC108235522
Toll-like receptor 21.
    
 0.582
mfsd9
Major facilitator superfamily domain containing 9.
      
 0.573
svopl
SVOP-like.
      
 0.571
mfsd6
Major facilitator superfamily domain containing 6a.
      
 0.564
mfsd13a
Major facilitator superfamily domain containing 13A.
      
 0.560
hsp90b1
Heat shock protein 90, beta (grp94), member 1.
     
 0.519
LOC108236201
Peptidoglycan recognition protein 6.
      
 0.491
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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