STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108247731Guanylate cyclase. (1013 aa)    
Predicted Functional Partners:
nppc
Natriuretic peptide C.
    
 0.749
LOC108248160
Natriuretic peptide A.
    
 0.729
LOC108248161
Natriuretic peptide B.
    
 0.596
guca1b
Guanylate cyclase activator 1B.
   
 0.535
LOC108236008
Guanylate cyclase activator 1C.
   
 0.457
LOC108239581
Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.
   
 
 0.436
LOC108231569
Uncharacterized protein.
   
 
 0.426
guca1a
Guanylate cyclase activator 1A.
   
 0.419
LOC108246056
Crystallin, beta B1, like 3; Belongs to the beta/gamma-crystallin family.
    
 
 0.413
gak
Cyclin G associated kinase.
      
 0.408
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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