STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108250113ABC transporter domain-containing protein. (668 aa)    
Predicted Functional Partners:
abcg4
ATP-binding cassette, sub-family G (WHITE), member 4a.
  
  
 
0.901
abcg5
ATP-binding cassette, sub-family G (WHITE), member 5.
   
0.792
apoa4
Apolipoprotein A-Ib.
   
 0.538
atp5f1c
ATP synthase subunit gamma.
   
   0.502
LOC108235346
Uncharacterized protein.
   
 0.486
ENSKMAP00000016700
Uncharacterized protein.
   
 0.486
atp5f1d
ATP synthase F1 subunit delta.
   
   0.476
cdca8
Cell division cycle associated 8.
   
 
 0.451
atp5f1b
ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.
   
 
 0.439
LOC108233951
Cytochrome c oxidase assembly homolog 15 (yeast).
    
 0.423
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.