STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sdhaf4Succinate dehydrogenase complex assembly factor 4. (100 aa)    
Predicted Functional Partners:
tac1
Tachykinin 1.
   
 
 0.803
sdha
Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
   
 
 0.739
ENSKMAP00000028244
Uncharacterized protein.
      
 0.661
lyrm7
LYR motif containing 7.
      
 0.609
sdhc
Succinate dehydrogenase complex, subunit C, integral membrane protein.
   
  
 0.574
ndufaf3
NADH:ubiquinone oxidoreductase complex assembly factor.
   
  
 0.562
LOC108233782
ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.
      
 0.529
LOC108250055
Ubiquinol-cytochrome c reductase complex assembly factor 1.
      
 0.529
LOC108246102
Cytochrome c oxidase subunit 4I2.
      
 0.529
LOC108243227
SCO cytochrome c oxidase assembly protein 1.
      
 0.529
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.