STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSKMAP00000023601Uncharacterized protein. (295 aa)    
Predicted Functional Partners:
LOC108242458
PAC domain-containing protein.
 
      0.899
Kcnh5
PAC domain-containing protein.
 
      0.898
ENSKMAP00000028548
Ion_trans domain-containing protein.
 
 
 
 0.842
ENSKMAP00000026664
Potassium voltage-gated channel, subfamily H (eag-related), member 8.
 
   
 0.770
LOC108246765
Potassium voltage-gated channel, subfamily H (eag-related), member 3.
 
   
 0.697
LOC108228616
Calmodulin 2a (phosphorylase kinase, delta); Belongs to the calmodulin family.
   
 
 0.524
calm1
Calmodulin 3a (phosphorylase kinase, delta); Belongs to the calmodulin family.
   
 
 0.524
LOC108241768
Calmodulin.
   
 
 0.524
LOC108240935
Calmodulin.
   
 
 0.524
LOC108237769
Potassium voltage-gated channel, subfamily H (eag-related), member 6a.
 
 
 
 0.500
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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