STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108238556Par-3 family cell polarity regulator beta b. (1204 aa)    
Predicted Functional Partners:
LOC108250564
Protein kinase C, zeta; Belongs to the protein kinase superfamily.
    
 0.834
prkci
Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.
    
 0.834
LOC108250860
Uncharacterized protein.
    
 0.772
LOC108237796
Par-6 family cell polarity regulator gamma b.
    
 0.772
pard6b
Par-6 partitioning defective 6 homolog beta (C. elegans).
    
 0.772
ift57
Intraflagellar transport 57 homolog (Chlamydomonas).
    
 0.593
Ift172
Uncharacterized protein.
    
 0.585
ift80
Intraflagellar transport 80 homolog (Chlamydomonas).
    
 0.584
traf3ip1
TNF receptor-associated factor 3 interacting protein 1.
    
 0.581
rps27a
Ribosomal protein S27a.
   
  0.559
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.