STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VANGL2Vang-like protein. (525 aa)    
Predicted Functional Partners:
dvl2
Dishevelled segment polarity protein 2.
    
 0.971
dvl1
Dishevelled segment polarity protein 1a.
    
 0.964
dvl3
Dishevelled segment polarity protein 3a.
    
 0.964
PRICKLE1
Prickle homolog 1a.
    
 0.914
prickle2
Prickle homolog 2b.
    
 0.913
LOC108235094
Prickle homolog 1b.
    
 0.913
LOC108232156
Prickle homolog 2a.
    
 0.907
prickle3
Prickle homolog 3.
    
 0.874
ENSKMAP00000025194
DIX domain-containing protein.
    
 0.661
sec24c
SEC24 homolog C, COPII coat complex component.
      
 0.635
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.