STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108240247Cholinergic receptor, nicotinic, beta 4 (neuronal). (466 aa)    
Predicted Functional Partners:
chrna1
Cholinergic receptor, nicotinic, alpha 1 (muscle).
  
0.791
ENSKMAP00000008661
Cholinergic receptor, nicotinic, alpha 4b.
  
 
0.685
LOC108248319
Synaptic vesicle glycoprotein 2.
      
 0.662
LOC108240269
Cholinergic receptor, nicotinic, alpha 3.
  
  
0.635
chrna5
Cholinergic receptor, nicotinic, alpha 5.
  
0.574
SV2C
Synaptic vesicle glycoprotein 2C.
      
 0.529
chrna2
Cholinergic receptor, nicotinic, alpha 2b (neuronal).
  
 
0.526
LOC108236400
Cholinergic receptor, nicotinic, beta polypeptide 3a.
  
0.513
LOC108243086
Cholinergic receptor, nicotinic, beta 3b (neuronal).
  
0.513
chrng
Cholinergic receptor, nicotinic, gamma.
  
  
 
0.442
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.