STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108237340Uncharacterized protein. (135 aa)    
Predicted Functional Partners:
LOC108250490
Neuromedin B receptor.
    
 0.980
GRPR
Gastrin releasing peptide receptor; Belongs to the G-protein coupled receptor 1 family.
    
 0.958
grpr
Gastrin-releasing peptide receptor; Belongs to the G-protein coupled receptor 1 family.
    
 0.958
ENSKMAP00000022603
Uncharacterized protein.
  
  
 
0.906
elp3
Elongator complex protein 3; Catalytic tRNA acetyltransferase subunit of the RNA polymerase II elongator complex, which is a component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation.
   
 
 0.828
elp5
Elongator acetyltransferase complex subunit 5.
   
 
 0.781
elp1
Elongator complex protein 1; Component of the RNA polymerase II elongator complex, a multiprotein complex associated with the RNA polymerase II (Pol II) holoenzyme, and which is involved in transcriptional elongation. Belongs to the ELP1/IKA1 family.
    
 
 0.770
sgce
Sarcoglycan, epsilon.
     
 0.647
LOC108248239
Sarcoglycan, alpha.
     
 0.647
elp4
Elongator acetyltransferase complex subunit 4.
   
 
 0.634
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.