STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pcgf6Polycomb group ring finger 6. (257 aa)    
Predicted Functional Partners:
rnf2
Ring finger protein 2.
   
0.925
YAF2
YY1 associated factor 2.
    
 0.883
yaf2
YY1 associated factor 2.
    
 0.883
RING1
Ring finger protein 1.
   
 0.882
ENSKMAP00000001971
THAP-type domain-containing protein.
    
 0.870
rybp
RING1 and YY1 binding protein b.
    
 0.841
skp1
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
    
 0.801
LOC108251719
BCOR domain-containing protein.
    
 0.785
LOC108249239
FCS-type domain-containing protein.
    
 0.775
mbtd1
Mbt domain containing 1.
    
 0.775
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.