STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108241987Heat shock cognate 70; Belongs to the heat shock protein 70 family. (654 aa)    
Predicted Functional Partners:
gak
Cyclin G associated kinase.
    
 0.943
LOC108240588
Mitogen-activated protein kinase.
   
 
 0.904
LOC108234067
Mitogen-activated protein kinase.
   
 
 0.902
stip1
Stress-induced phosphoprotein 1.
  
 0.889
bag3
BCL2 associated athanogene 3.
   
 0.849
LOC108231826
Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 2.
 
 
 0.813
LOC108231827
Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1.
 
 
 0.813
hsp90ab1
HATPase_c domain-containing protein.
 
 
 0.812
DNAJA4
DnaJ heat shock protein family (Hsp40) member A4.
 
 0.805
LOC108232675
DnaJ heat shock protein family (Hsp40) member A1.
 
 0.804
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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