STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108241959Si:dkey-238d18.5. (498 aa)    
Predicted Functional Partners:
LOC108239380
Ependymin-like 1.
      
 0.679
LOC108250639
Myelin basic protein a.
      
 0.675
LOC108238185
Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase; Belongs to the glycosyltransferase 43 family.
     
 0.664
LOC108238002
Neuregulin 2b.
     
 0.635
LOC108236992
Neuregulin 2a.
     
 0.635
aspa
Aspartoacylase.
   
  
 0.633
ENSKMAP00000023714
5-hydroxytryptamine (serotonin) receptor 3A.
      
 0.633
LOC108248883
Uncharacterized protein.
   
 
 0.602
LOC108247493
Erythropoietin receptor.
    
 
 0.508
csf3r
Colony stimulating factor 3 receptor (granulocyte).
   
  
 0.495
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.