STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108230946Cofilin 2 (muscle); Belongs to the actin-binding proteins ADF family. (166 aa)    
Predicted Functional Partners:
LOC108246059
LIM domain kinase 1a.
   
 0.977
limk2
LIM domain kinase 2.
   
 0.971
LOC108238894
LIM domain kinase 1b.
   
 0.970
actb
Uncharacterized protein.
   
 0.952
LOC108232731
Slingshot protein phosphatase 1b.
    
 0.938
LOC108242402
Si:ch211-203d1.3.
    
 0.938
ssh1
Slingshot protein phosphatase 1a.
    
 0.938
LOC108246700
Slingshot protein phosphatase 2a.
    
 0.938
LOC108248424
Slingshot protein phosphatase 2b.
    
 0.938
LOC108233965
ADF-H domain-containing protein; Belongs to the actin-binding proteins ADF family.
  
  
 
0.905
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.