STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSKMAP00000024581Uncharacterized protein. (261 aa)    
Predicted Functional Partners:
ube2i
Ubiquitin-conjugating enzyme E2Ib; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.636
LOC108236207
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.636
LOC108250655
Potassium channel tetramerization domain containing 2.
    
  0.584
LOC108247197
Angiomotin.
      
 0.544
lin37
Lin-37 DREAM MuvB core complex component.
      
 0.502
mcm3ap
Minichromosome maintenance complex component 3 associated protein.
      
 0.502
sae1
SUMO1 activating enzyme subunit 1.
    
 0.465
LOC108244389
SET domain and mariner transposase fusion gene.
   
 
 0.423
ENSKMAP00000002078
Uncharacterized protein.
      
 0.418
socs7
Suppressor of cytokine signaling 7.
      
 0.418
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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