STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108237004Peroxiredoxin 4. (259 aa)    
Predicted Functional Partners:
txndc5
Thioredoxin domain containing 5; Belongs to the protein disulfide isomerase family.
  
 0.943
erp44
Endoplasmic reticulum protein 44.
  
 0.903
pdia6
Protein disulfide isomerase family A, member 6; Belongs to the protein disulfide isomerase family.
  
 0.895
srxn1
Sulfiredoxin.
   
 0.888
txn
Thioredoxin; Belongs to the thioredoxin family.
  
 0.852
LOC108240736
NME/NM23 family member 8; Belongs to the NDK family.
  
 0.832
txn2
Thioredoxin 2.
  
 0.796
LOC108251786
C-type lectin domain-containing protein.
  
 0.720
ENSKMAP00000014074
Uncharacterized protein.
  
 0.720
cat
Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide.
  
 
 0.713
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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