STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSKMAP00000024705Uncharacterized protein. (516 aa)    
Predicted Functional Partners:
parp4
Poly [ADP-ribose] polymerase.
 
     0.792
mvp
Major vault protein.
    
 
 0.767
LOC108245935
Uncharacterized protein.
    
 0.645
LOC108245390
Poly (ADP-ribose) glycohydrolase, like.
    
 0.645
LOC108245173
Poly (ADP-ribose) glycohydrolase a.
    
 0.645
xrcc5
X-ray repair cross-complementing protein 5; Single-stranded DNA-dependent ATP-dependent helicase. Belongs to the ku80 family.
   
 
 0.640
xpc
Xeroderma pigmentosum, complementation group C.
    
 0.607
xrcc6
X-ray repair complementing defective repair in Chinese hamster cells 6.
   
 
 0.602
LOC108228450
Histone PARylation factor 1.
    
 
 0.595
LOC108239168
Core histone macro-H2A; Variant histone H2A which replaces conventional H2A in a subset of nucleosomes.
    
 
 0.588
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.