STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chaf1bChromatin assembly factor 1, subunit B. (613 aa)    
Predicted Functional Partners:
chaf1a
Chromatin assembly factor 1, subunit A (p150).
   
 
 0.962
LOC108241280
Anti-silencing function 1Ba histone chaperone.
   
 
 0.929
LOC108241448
Anti-silencing function 1Ba histone chaperone.
   
 
 0.929
pcna
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 
 0.915
LOC108237907
Retinoblastoma binding protein 4, like.
   
 
 0.898
LOC108232401
Retinoblastoma binding protein 4.
   
 
 0.898
ENSKMAP00000022147
WD repeat domain 73.
   
 
 0.862
insig2
Insulin-induced gene protein; Mediates feedback control of cholesterol synthesis. Belongs to the INSIG family.
    
 
 0.825
insig1
Insulin-induced gene protein; Mediates feedback control of cholesterol synthesis.
    
 
 0.825
cdc45
CDC45 cell division cycle 45 homolog (S. cerevisiae).
   
  
 0.757
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.