STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108241448Anti-silencing function 1Ba histone chaperone. (199 aa)    
Predicted Functional Partners:
LOC108242803
Protein HIRA; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family.
    
 0.970
chaf1b
Chromatin assembly factor 1, subunit B.
   
 
 0.929
cabin1
Calcineurin binding protein 1.
    
 0.923
ENSKMAP00000013455
Ubinuclein 1.
    
 0.918
mcm2
DNA helicase; Belongs to the MCM family.
   
 
 0.903
NASP
Nuclear autoantigenic sperm protein.
   
 
 0.859
LOC108238368
Nuclear autoantigenic sperm protein (histone-binding).
   
 
 0.859
hat1
Histone acetyltransferase type B catalytic subunit; Acetylates soluble but not nucleosomal histone H4 at 'Lys-5' (H4K5ac) and 'Lys-12' (H4K12ac) and, to a lesser extent, acetylates histone H2A at 'Lys-5' (H2AK5ac). Has intrinsic substrate specificity that modifies lysine in recognition sequence GXGKXG.
   
 
 0.859
LOC108248076
Checkpoint kinase 2.
   
 
 0.847
chaf1a
Chromatin assembly factor 1, subunit A (p150).
   
 
 0.798
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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