STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc35b2Solute carrier family 35 member B2. (435 aa)    
Predicted Functional Partners:
rpl15
Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.
 
      0.825
ext2
Exostosin glycosyltransferase 2; Belongs to the glycosyltransferase 47 family.
   
  
 0.675
slc35b4
Solute carrier family 35 member B4.
      
 0.660
b3gat3
Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase; Belongs to the glycosyltransferase 43 family.
   
 
 0.647
uxs1
UDP-glucuronate decarboxylase 1.
   
  
 0.640
slc35c1
Solute carrier family 35 member C1.
   
  
 0.627
slc35f6
Solute carrier family 35 member F6; May play a role as a nucleotide-sugar transporter.
      
 0.625
atox1
Antioxidant 1 copper chaperone.
      
 0.616
b4galt7
Xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I).
   
  
 0.590
nfkbie
Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, epsilon.
 
  
 
 0.588
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.