STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ncdnNeurochondrin. (791 aa)    
Predicted Functional Partners:
aar2
AAR2 splicing factor.
    
 
 0.575
LOC108233152
Copine family member IX.
   
  
 0.554
mms19
MMS19 homolog, cytosolic iron-sulfur assembly component.
      
 0.491
LOC108243560
Regulator of G protein signaling 8.
      
 0.489
ttc27
Tetratricopeptide repeat domain 27.
    
 
 0.486
eapp
E2f-associated phosphoprotein.
    
 
 0.449
grasp
GRP1 (general receptor for phosphoinositides 1)-associated scaffold protein.
      
 0.439
dner
Delta/notch-like EGF repeat containing.
      
 0.408
slc7a6os
Solute carrier family 7 member 6 opposite strand.
      
 0.403
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.