STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108244330Ring finger protein 11a. (147 aa)    
Predicted Functional Partners:
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.619
ube2n
Ubiquitin conjugating enzyme E2 N; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.604
LOC108235081
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.604
LOC108233117
E3 ubiquitin-protein ligase.
    
 0.590
LOC108231686
E3 ubiquitin-protein ligase.
    
 0.590
tnfaip3
Tumor necrosis factor, alpha-induced protein 3.
   
 
 0.563
rps27a
Ribosomal protein S27a.
    
 0.556
LOC108242005
Tax1 (human T-cell leukemia virus type I) binding protein 1b.
   
 
 0.516
trip12
Thyroid hormone receptor interactor 12.
   
 
 0.510
LOC108241101
Tax1 (human T-cell leukemia virus type I) binding protein 1a.
   
 
 0.472
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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