STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108240356alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (630 aa)    
Predicted Functional Partners:
man1b1
alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.
  
 
0.934
LOC108241416
alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.
  
 
0.934
LOC108244446
Mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase b.
    
 0.927
LOC108249853
Mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase a.
    
 0.927
man1a2
alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.
  
  
 
0.902
man1a1
alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.
  
  
 
0.902
mogs
Mannosyl-oligosaccharide glucosidase.
   
  
 0.453
edem1
alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.
   
  
0.410
sppl3
Signal peptide peptidase 3.
      
 0.410
rer1
Protein RER1; Involved in the retrieval of endoplasmic reticulum membrane proteins from the early Golgi compartment.
      
 0.406
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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