STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
clip1CAP-GLY domain containing linker protein 1a. (2197 aa)    
Predicted Functional Partners:
mtor
Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.
   
 0.921
clasp2
Cytoplasmic linker associated protein 2.
    
 
 0.721
clasp1
Cytoplasmic linker associated protein 1a.
    
 
 0.721
trim36
Tripartite motif containing 36.
    
 
 0.680
LOC108242888
Dynactin 1a.
    
 
0.622
nudc
NudC nuclear distribution protein.
     
 0.621
bub3
BUB3 mitotic checkpoint protein.
    
 0.598
mapre1
Microtubule-associated protein, RP/EB family, member 1b.
    
 
 0.596
dctn1
Dynactin domain-containing protein.
    
 
 0.594
kif17
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 
 0.581
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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