Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| LOC108228847 | ctdp1 | ENSKMAP00000008086 | ENSKMAP00000002461 | TFIIS N-terminal domain-containing protein. | RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II. | 0.940 |
| LOC108228847 | ctr9 | ENSKMAP00000008086 | ENSKMAP00000007381 | TFIIS N-terminal domain-containing protein. | CTR9 homolog, Paf1/RNA polymerase II complex component. | 0.907 |
| LOC108228847 | leo1 | ENSKMAP00000008086 | ENSKMAP00000002496 | TFIIS N-terminal domain-containing protein. | LEO1 homolog, Paf1/RNA polymerase II complex component. | 0.922 |
| LOC108228847 | polr2a | ENSKMAP00000008086 | ENSKMAP00000022045 | TFIIS N-terminal domain-containing protein. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.944 |
| LOC108228847 | polr2c | ENSKMAP00000008086 | ENSKMAP00000021802 | TFIIS N-terminal domain-containing protein. | Polymerase (RNA) II (DNA directed) polypeptide C. | 0.934 |
| LOC108228847 | ssrp1 | ENSKMAP00000008086 | ENSKMAP00000015779 | TFIIS N-terminal domain-containing protein. | FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...] | 0.967 |
| LOC108228847 | supt16h | ENSKMAP00000008086 | ENSKMAP00000005995 | TFIIS N-terminal domain-containing protein. | SPT16 homolog, facilitates chromatin remodeling subunit. | 0.960 |
| LOC108228847 | supt4h1 | ENSKMAP00000008086 | ENSKMAP00000017600 | TFIIS N-terminal domain-containing protein. | Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family. | 0.926 |
| LOC108228847 | supt5h | ENSKMAP00000008086 | ENSKMAP00000005883 | TFIIS N-terminal domain-containing protein. | Transcription elongation factor SPT5. | 0.959 |
| LOC108228847 | supt6h | ENSKMAP00000008086 | ENSKMAP00000026037 | TFIIS N-terminal domain-containing protein. | Transcription elongation factor spt6; Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII). Belongs to the SPT6 family. | 0.999 |
| ctdp1 | LOC108228847 | ENSKMAP00000002461 | ENSKMAP00000008086 | RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II. | TFIIS N-terminal domain-containing protein. | 0.940 |
| ctdp1 | polr2a | ENSKMAP00000002461 | ENSKMAP00000022045 | RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.993 |
| ctdp1 | polr2c | ENSKMAP00000002461 | ENSKMAP00000021802 | RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II. | Polymerase (RNA) II (DNA directed) polypeptide C. | 0.989 |
| ctdp1 | ssrp1 | ENSKMAP00000002461 | ENSKMAP00000015779 | RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II. | FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...] | 0.791 |
| ctdp1 | supt16h | ENSKMAP00000002461 | ENSKMAP00000005995 | RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II. | SPT16 homolog, facilitates chromatin remodeling subunit. | 0.805 |
| ctdp1 | supt4h1 | ENSKMAP00000002461 | ENSKMAP00000017600 | RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II. | Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family. | 0.946 |
| ctdp1 | supt5h | ENSKMAP00000002461 | ENSKMAP00000005883 | RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II. | Transcription elongation factor SPT5. | 0.937 |
| ctdp1 | supt6h | ENSKMAP00000002461 | ENSKMAP00000026037 | RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II. | Transcription elongation factor spt6; Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII). Belongs to the SPT6 family. | 0.960 |
| ctr9 | LOC108228847 | ENSKMAP00000007381 | ENSKMAP00000008086 | CTR9 homolog, Paf1/RNA polymerase II complex component. | TFIIS N-terminal domain-containing protein. | 0.907 |
| ctr9 | leo1 | ENSKMAP00000007381 | ENSKMAP00000002496 | CTR9 homolog, Paf1/RNA polymerase II complex component. | LEO1 homolog, Paf1/RNA polymerase II complex component. | 0.999 |
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