STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108239237Rho GTPase activating protein 17b. (804 aa)    
Predicted Functional Partners:
LOC108248645
Cell division cycle 42.
   
 0.943
CDC42
Cell division cycle 42.
   
 0.943
LOC108247197
Angiomotin.
    
 0.931
LOC108235453
Uncharacterized protein.
   
 0.929
LOC108235454
Uncharacterized protein.
   
 0.929
LOC108237171
Uncharacterized protein.
   
 0.926
RAC1
Rac family small GTPase 1.
   
 0.926
RAC1-2
Uncharacterized protein.
   
 0.926
LOC108237172
Uncharacterized protein.
   
 0.926
RAC1-4
Rac family small GTPase 1.
   
 0.926
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.