Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC108240959 | LOC108250396 | ENSKMAP00000027211 | ENSKMAP00000029795 | Si:dkeyp-97b10.3. | Uncharacterized protein. | 0.481 |
LOC108240959 | apaf1 | ENSKMAP00000027211 | ENSKMAP00000012683 | Si:dkeyp-97b10.3. | Apoptotic protease-activating factor 1; Oligomeric Apaf-1 mediates the cytochrome c-dependent autocatalytic activation of pro-caspase-9 (Apaf-3), leading to the activation of caspase-3 and apoptosis. This activation requires ATP. | 0.730 |
LOC108240959 | appl1 | ENSKMAP00000027211 | ENSKMAP00000024467 | Si:dkeyp-97b10.3. | Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1. | 0.643 |
LOC108240959 | appl2 | ENSKMAP00000027211 | ENSKMAP00000013056 | Si:dkeyp-97b10.3. | Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2. | 0.643 |
LOC108240959 | birc6 | ENSKMAP00000027211 | ENSKMAP00000018194 | Si:dkeyp-97b10.3. | Baculoviral IAP repeat containing 6. | 0.695 |
LOC108240959 | cenpk | ENSKMAP00000027211 | ENSKMAP00000028198 | Si:dkeyp-97b10.3. | Centromere protein K. | 0.478 |
LOC108240959 | cenpm | ENSKMAP00000027211 | ENSKMAP00000026976 | Si:dkeyp-97b10.3. | Proliferation associated nuclear element. | 0.487 |
LOC108240959 | cenpn | ENSKMAP00000027211 | ENSKMAP00000013893 | Si:dkeyp-97b10.3. | Centromere protein N. | 0.523 |
LOC108240959 | mib2 | ENSKMAP00000027211 | ENSKMAP00000005963 | Si:dkeyp-97b10.3. | Mindbomb E3 ubiquitin protein ligase 2. | 0.562 |
LOC108240959 | ripk4 | ENSKMAP00000027211 | ENSKMAP00000013816 | Si:dkeyp-97b10.3. | Receptor-interacting serine-threonine kinase 4. | 0.498 |
LOC108250396 | LOC108240959 | ENSKMAP00000029795 | ENSKMAP00000027211 | Uncharacterized protein. | Si:dkeyp-97b10.3. | 0.481 |
LOC108250396 | cenpk | ENSKMAP00000029795 | ENSKMAP00000028198 | Uncharacterized protein. | Centromere protein K. | 0.985 |
LOC108250396 | cenpm | ENSKMAP00000029795 | ENSKMAP00000026976 | Uncharacterized protein. | Proliferation associated nuclear element. | 0.987 |
LOC108250396 | cenpn | ENSKMAP00000029795 | ENSKMAP00000013893 | Uncharacterized protein. | Centromere protein N. | 0.990 |
apaf1 | LOC108240959 | ENSKMAP00000012683 | ENSKMAP00000027211 | Apoptotic protease-activating factor 1; Oligomeric Apaf-1 mediates the cytochrome c-dependent autocatalytic activation of pro-caspase-9 (Apaf-3), leading to the activation of caspase-3 and apoptosis. This activation requires ATP. | Si:dkeyp-97b10.3. | 0.730 |
apaf1 | birc6 | ENSKMAP00000012683 | ENSKMAP00000018194 | Apoptotic protease-activating factor 1; Oligomeric Apaf-1 mediates the cytochrome c-dependent autocatalytic activation of pro-caspase-9 (Apaf-3), leading to the activation of caspase-3 and apoptosis. This activation requires ATP. | Baculoviral IAP repeat containing 6. | 0.969 |
apaf1 | ripk4 | ENSKMAP00000012683 | ENSKMAP00000013816 | Apoptotic protease-activating factor 1; Oligomeric Apaf-1 mediates the cytochrome c-dependent autocatalytic activation of pro-caspase-9 (Apaf-3), leading to the activation of caspase-3 and apoptosis. This activation requires ATP. | Receptor-interacting serine-threonine kinase 4. | 0.427 |
appl1 | LOC108240959 | ENSKMAP00000024467 | ENSKMAP00000027211 | Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1. | Si:dkeyp-97b10.3. | 0.643 |
appl1 | appl2 | ENSKMAP00000024467 | ENSKMAP00000013056 | Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1. | Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2. | 0.992 |
appl1 | birc6 | ENSKMAP00000024467 | ENSKMAP00000018194 | Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1. | Baculoviral IAP repeat containing 6. | 0.543 |
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