STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GID4-2GID complex subunit 4 homolog. (229 aa)    
Predicted Functional Partners:
armc8
Armadillo repeat containing 8.
    
 
 0.913
LOC108231957
GID complex subunit 8 homolog.
    
 
 0.824
LOC108235174
GID complex subunit 8 homolog b (S. cerevisiae).
    
 
 0.824
rmnd5b
Required for meiotic nuclear division 5 homolog B.
    
 
 0.773
LOC108228576
RAN binding protein 10.
    
 
 0.717
ranbp9
RAN binding protein 9.
    
 
 0.717
ENSKMAP00000028316
Uncharacterized protein.
    
 
 0.717
SPRYD3
SPRY domain containing 3.
    
 
 0.677
wdr26
WD repeat domain 26b.
    
 
 0.656
LOC108247745
Uncharacterized protein.
    
 
 0.656
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.