STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ndufaf6NADH:ubiquinone oxidoreductase complex assembly factor 6. (307 aa)    
Predicted Functional Partners:
LOC108229507
NADH:ubiquinone oxidoreductase complex assembly factor 5.
   
 0.965
ND1
NADH-ubiquinone oxidoreductase chain 1; Belongs to the complex I subunit 1 family.
   
 
 0.918
ndufa10
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.
   
 0.852
LOC108246350
Si:ch1073-13h15.3.
  
 
 0.852
retsat
Retinol saturase (all-trans-retinol 13,14-reductase).
  
 
 0.852
pyroxd2
Pyridine nucleotide-disulphide oxidoreductase domain 2.
  
 
 0.852
ndufaf4
NADH:ubiquinone oxidoreductase complex assembly factor 4.
     
 0.842
ERG28
Ergosterol biosynthesis 28 homolog.
   
 
 0.841
ndufaf7
Protein arginine methyltransferase NDUFAF7; Arginine methyltransferase involved in the assembly or stability of mitochondrial NADH:ubiquinone oxidoreductase complex (complex I).
     
 0.837
ndufs3
NADH:ubiquinone oxidoreductase core subunit S3; Belongs to the complex I 30 kDa subunit family.
   
 0.825
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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