STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pdcd4Programmed cell death 4b. (477 aa)    
Predicted Functional Partners:
eif4a2
Eukaryotic translation initiation factor 4A, isoform 2; Belongs to the DEAD box helicase family.
   
 0.675
LOC108242297
Eukaryotic translation initiation factor 4A1B; Belongs to the DEAD box helicase family.
   
 0.675
pten
Phosphatase and tensin homolog; Tumor suppressor. Acts as a dual-specificity protein phosphatase, dephosphorylating tyrosine-, serine- and threonine- phosphorylated proteins. Also acts as a lipid phosphatase. Belongs to the PTEN phosphatase protein family.
      
 0.511
LOC108233901
Uncharacterized protein.
      
 0.491
NPTX1
Uncharacterized protein.
      
 0.491
nsmaf
Neutral sphingomyelinase (N-SMase) activation associated factor.
      
 0.491
LOC108234099
Glutathione S-transferase.
      
 0.491
LOC108236589
NK3 homeobox 1.
      
 0.467
map3k2
Mitogen-activated protein kinase kinase kinase 2.
      
 0.457
LOC108242388
F-box and WD repeat domain containing 11a.
    
 
 0.431
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.