STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108235141Troponin T type 2a (cardiac). (301 aa)    
Predicted Functional Partners:
LOC108250355
Uncharacterized protein.
   
 0.965
TNNC1
Troponin C type 1a (slow).
   
 0.965
tpm3
Uncharacterized protein; Belongs to the tropomyosin family.
   
 0.962
LOC108242564
Tropomyosin 2 (beta); Belongs to the tropomyosin family.
   
 0.962
TPM1
Uncharacterized protein; Belongs to the tropomyosin family.
   
 0.962
LOC108237348
Uncharacterized protein; Belongs to the tropomyosin family.
   
 0.962
LOC108232925
Tropomyosin 4; Belongs to the tropomyosin family.
   
 0.962
tpm4
Tropomyosin 4a; Belongs to the tropomyosin family.
   
 0.962
ACTC1
Zgc:86709.
   
 0.922
ACTA1
Actin alpha 1, skeletal muscle.
   
 0.922
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.