STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ankmy2Ankyrin repeat and MYND domain containing 2a. (450 aa)    
Predicted Functional Partners:
traf3ip1
TNF receptor-associated factor 3 interacting protein 1.
    
 0.746
usp25
Ubiquitin specific peptidase 25; Belongs to the peptidase C19 family.
    
 0.679
LOC108231067
Lectin, mannose-binding 2-like a.
    
 
 0.667
snx13
Sorting nexin 13.
    
 
 0.663
pde8a
Phosphodiesterase.
      
 0.662
ppp2r5c
Serine/threonine protein phosphatase 2A regulatory subunit; Belongs to the phosphatase 2A regulatory subunit.
    
 0.650
COG5
Component of oligomeric golgi complex 5.
     
 0.629
prmt7
Protein arginine N-methyltransferase; Arginine methyltransferase that can both catalyze the formation of omega-N monomethylarginine (MMA) and symmetrical dimethylarginine (sDMA), with a preference for the formation of MMA. Specifically mediates the symmetrical dimethylation of arginine residues in the small nuclear ribonucleoproteins Sm D1 (SNRPD1) and Sm D3 (SNRPD3); such methylation being required for the assembly and biogenesis of snRNP core particles. Specifically mediates the symmetric dimethylation of histone H4 'Arg-3' to form H4R3me2s. Plays a role in gene imprinting by being r [...]
 
  
  0.576
tspan13
Tetraspanin 13a; Belongs to the tetraspanin (TM4SF) family.
      
 0.572
ift80
Intraflagellar transport 80 homolog (Chlamydomonas).
    
 0.555
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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