STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108247335Homeobox domain-containing protein. (295 aa)    
Predicted Functional Partners:
LOC108243703
Arylalkylamine N-acetyltransferase 2.
      
 0.487
LOC108231337
Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1.
      
 0.483
hhex
Homeobox domain-containing protein.
   
  
 0.426
LOC108233570
Zinc finger protein 366.
    
 
 0.425
rorb
RAR-related orphan receptor B.
    
 
 0.412
fgf5
Fibroblast growth factor; Belongs to the heparin-binding growth factors family.
    
 
 0.406
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.