Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CUL3 | LOC108238649 | ENSKMAP00000027871 | ENSKMAP00000027449 | Cullin 3; Belongs to the cullin family. | NEDD8 ubiquitin like modifier. | 0.883 |
CUL3 | LOC108240497 | ENSKMAP00000027871 | ENSKMAP00000002393 | Cullin 3; Belongs to the cullin family. | CULLIN_2 domain-containing protein; Belongs to the cullin family. | 0.900 |
CUL3 | cul1 | ENSKMAP00000027871 | ENSKMAP00000023937 | Cullin 3; Belongs to the cullin family. | Cullin 1b; Belongs to the cullin family. | 0.680 |
CUL3 | fbxo32 | ENSKMAP00000027871 | ENSKMAP00000028467 | Cullin 3; Belongs to the cullin family. | F-box protein 32. | 0.625 |
CUL3 | nae1 | ENSKMAP00000027871 | ENSKMAP00000001051 | Cullin 3; Belongs to the cullin family. | NEDD8-activating enzyme E1 regulatory subunit; Regulatory subunit of the dimeric UBA3-NAE1 E1 enzyme. E1 activates NEDD8 by first adenylating its C-terminal glycine residue with ATP, thereafter linking this residue to the side chain of the catalytic cysteine, yielding a NEDD8-UBA3 thioester and free AMP. E1 finally transfers NEDD8 to the catalytic cysteine of UBE2M. Belongs to the ubiquitin-activating E1 family. ULA1 subfamily. | 0.776 |
CUL3 | rbx1 | ENSKMAP00000027871 | ENSKMAP00000020413 | Cullin 3; Belongs to the cullin family. | Ring-box 1, E3 ubiquitin protein ligase. | 0.969 |
CUL3 | skp1 | ENSKMAP00000027871 | ENSKMAP00000026700 | Cullin 3; Belongs to the cullin family. | S-phase kinase-associated protein 1; Belongs to the SKP1 family. | 0.949 |
LOC108238649 | CUL3 | ENSKMAP00000027449 | ENSKMAP00000027871 | NEDD8 ubiquitin like modifier. | Cullin 3; Belongs to the cullin family. | 0.883 |
LOC108238649 | LOC108240497 | ENSKMAP00000027449 | ENSKMAP00000002393 | NEDD8 ubiquitin like modifier. | CULLIN_2 domain-containing protein; Belongs to the cullin family. | 0.883 |
LOC108238649 | cacul1 | ENSKMAP00000027449 | ENSKMAP00000011140 | NEDD8 ubiquitin like modifier. | CDK2 associated cullin domain 1; Belongs to the cullin family. | 0.828 |
LOC108238649 | cul1 | ENSKMAP00000027449 | ENSKMAP00000023937 | NEDD8 ubiquitin like modifier. | Cullin 1b; Belongs to the cullin family. | 0.986 |
LOC108238649 | fbxo32 | ENSKMAP00000027449 | ENSKMAP00000028467 | NEDD8 ubiquitin like modifier. | F-box protein 32. | 0.576 |
LOC108238649 | nae1 | ENSKMAP00000027449 | ENSKMAP00000001051 | NEDD8 ubiquitin like modifier. | NEDD8-activating enzyme E1 regulatory subunit; Regulatory subunit of the dimeric UBA3-NAE1 E1 enzyme. E1 activates NEDD8 by first adenylating its C-terminal glycine residue with ATP, thereafter linking this residue to the side chain of the catalytic cysteine, yielding a NEDD8-UBA3 thioester and free AMP. E1 finally transfers NEDD8 to the catalytic cysteine of UBE2M. Belongs to the ubiquitin-activating E1 family. ULA1 subfamily. | 0.983 |
LOC108238649 | rbx1 | ENSKMAP00000027449 | ENSKMAP00000020413 | NEDD8 ubiquitin like modifier. | Ring-box 1, E3 ubiquitin protein ligase. | 0.986 |
LOC108238649 | skp1 | ENSKMAP00000027449 | ENSKMAP00000026700 | NEDD8 ubiquitin like modifier. | S-phase kinase-associated protein 1; Belongs to the SKP1 family. | 0.958 |
LOC108240497 | CUL3 | ENSKMAP00000002393 | ENSKMAP00000027871 | CULLIN_2 domain-containing protein; Belongs to the cullin family. | Cullin 3; Belongs to the cullin family. | 0.900 |
LOC108240497 | LOC108238649 | ENSKMAP00000002393 | ENSKMAP00000027449 | CULLIN_2 domain-containing protein; Belongs to the cullin family. | NEDD8 ubiquitin like modifier. | 0.883 |
LOC108240497 | cul1 | ENSKMAP00000002393 | ENSKMAP00000023937 | CULLIN_2 domain-containing protein; Belongs to the cullin family. | Cullin 1b; Belongs to the cullin family. | 0.680 |
LOC108240497 | fbxo32 | ENSKMAP00000002393 | ENSKMAP00000028467 | CULLIN_2 domain-containing protein; Belongs to the cullin family. | F-box protein 32. | 0.625 |
LOC108240497 | nae1 | ENSKMAP00000002393 | ENSKMAP00000001051 | CULLIN_2 domain-containing protein; Belongs to the cullin family. | NEDD8-activating enzyme E1 regulatory subunit; Regulatory subunit of the dimeric UBA3-NAE1 E1 enzyme. E1 activates NEDD8 by first adenylating its C-terminal glycine residue with ATP, thereafter linking this residue to the side chain of the catalytic cysteine, yielding a NEDD8-UBA3 thioester and free AMP. E1 finally transfers NEDD8 to the catalytic cysteine of UBE2M. Belongs to the ubiquitin-activating E1 family. ULA1 subfamily. | 0.776 |
page 1 of 4