STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108232213R-spondin 3. (325 aa)    
Predicted Functional Partners:
znrf3
Zinc and ring finger 3.
   
 0.981
lgr4
Leucine-rich repeat containing G protein-coupled receptor 4.
   
 0.979
rnf43
RING-type domain-containing protein.
   
 0.977
LOC108250476
G_PROTEIN_RECEP_F1_2 domain-containing protein.
   
 0.972
LGR6
Leucine rich repeat containing G protein-coupled receptor 6.
    
 0.935
rspo1
R-spondin 1.
  
  
 
0.595
rps27a
Ribosomal protein S27a.
   
 
  0.593
ubb
Uncharacterized protein.
   
 
  0.590
ENSKMAP00000008582
Relaxin family peptide receptor 2a.
   
 0.533
rxfp1
Relaxin family peptide receptor 1.
   
 0.533
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.