STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108234126ST3 beta-galactoside alpha-2,3-sialyltransferase 7; Belongs to the glycosyltransferase 29 family. (393 aa)    
Predicted Functional Partners:
b4galnt1
Beta-1,4 N-acetylgalactosaminyltransferase.
     
 0.904
st3gal5
ST3 beta-galactoside alpha-2,3-sialyltransferase 5; Belongs to the glycosyltransferase 29 family.
  
  
 
0.903
hexb
Beta-hexosaminidase.
     
 0.901
LOC108229974
Hexosaminidase A (alpha polypeptide).
     
 0.901
st8sia1
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1; Belongs to the glycosyltransferase 29 family.
     
 0.900
glb1
Beta-galactosidase.
   
 
 0.804
LOC108240795
Galactosidase, beta 1-like; Belongs to the glycosyl hydrolase 35 family.
   
 
 0.804
LOC108247664
Notochord granular surface; Belongs to the intermediate filament family.
   
  
 0.554
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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