STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108237489Metallothionein; Metallothioneins have a high content of cysteine residues that bind various heavy metals. (60 aa)    
Predicted Functional Partners:
LOC108232849
Lysyl oxidase-like 5b.
      
 0.584
slc30a4
Solute carrier family 30 member 4.
   
  
 0.523
sod3
Superoxide dismutase [Cu-Zn]; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family.
    
 
 0.502
sod1
Superoxide dismutase [Cu-Zn]; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family.
    
 
 0.502
slc11a2
Solute carrier family 11 member 2.
   
  
 0.497
LOC108243233
Growth hormone 1.
      
 0.494
atox1
Antioxidant 1 copper chaperone.
   
  
 0.473
serpinh1
Heat shock protein 47; Belongs to the serpin family.
   
  
 0.470
slc31a1
Solute carrier family 31 member 1.
   
 
 0.422
slc31a2
Solute carrier family 31 member 2.
   
 
 0.422
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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