STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mbtps2Membrane-bound transcription factor peptidase, site 2. (500 aa)    
Predicted Functional Partners:
LOC108245717
SAMM50 sorting and assembly machinery component.
  
  
 0.873
LOC108250208
Sorting and assembly machinery component 50 homolog, like.
  
  
 0.873
srebf2
Sterol regulatory element binding transcription factor 2.
    
 0.788
srebf1
Sterol regulatory element binding transcription factor 1.
    
 0.788
atf6
Activating transcription factor 6.
     
 0.786
LOC108246380
BZIP domain-containing protein.
     
 0.786
nus1
NUS1 dehydrodolichyl diphosphate synthase subunit.
  
  
 0.767
dhdds
Alkyl transferase; Belongs to the UPP synthase family.
  
  
 0.767
creb3l1
BZIP domain-containing protein.
     
 0.749
ALDH18A1
Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.
     
 0.747
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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