STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Myo5cMyosin VC; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (698 aa)    
Predicted Functional Partners:
ENSKMAP00000011441
Uncharacterized protein.
 
  
 0.903
LOC108241321
Myosin_tail_1 domain-containing protein.
 
 
 0.872
ENSKMAP00000002089
Myosin_tail_1 domain-containing protein.
 
 
 0.869
ENSKMAP00000010800
Myosin_tail_1 domain-containing protein.
 
 
 0.866
ENSKMAP00000010495
Uncharacterized protein.
 
  
 0.864
LOC108238638
Myosin_tail_1 domain-containing protein.
 
 
 0.856
LOC108235892
Myosin_tail_1 domain-containing protein.
 
 
 0.821
LOC108230830
Uncharacterized protein.
   
 0.659
LOC108230746
RAB11B, member RAS oncogene family, b.
   
 0.659
LOC108239416
Uncharacterized protein.
   
 0.659
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.