Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSKMAP00000022747 | LOC108234791 | ENSKMAP00000022747 | ENSKMAP00000005018 | Golgi transport 1A. | Cytochrome b5 reductase 4. | 0.669 |
ENSKMAP00000022747 | LOC108237431 | ENSKMAP00000022747 | ENSKMAP00000029551 | Golgi transport 1A. | Zgc:110789. | 0.673 |
ENSKMAP00000022747 | TYMP | ENSKMAP00000022747 | ENSKMAP00000025667 | Golgi transport 1A. | Thymidine phosphorylase; Catalyzes the reversible phosphorolysis of thymidine. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis. Belongs to the thymidine/pyrimidine-nucleoside phosphorylase family. | 0.454 |
ENSKMAP00000022747 | dhodh | ENSKMAP00000022747 | ENSKMAP00000002131 | Golgi transport 1A. | Dihydroorotate dehydrogenase (quinone), mitochondrial; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | 0.900 |
ENSKMAP00000022747 | dpyd | ENSKMAP00000022747 | ENSKMAP00000012788 | Golgi transport 1A. | Dihydropyrimidine dehydrogenase [NADP(+)]; Involved in pyrimidine base degradation. Catalyzes the reduction of uracil and thymine; Belongs to the dihydropyrimidine dehydrogenase family. | 0.900 |
ENSKMAP00000022747 | gart | ENSKMAP00000022747 | ENSKMAP00000001257 | Golgi transport 1A. | Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family. | 0.800 |
ENSKMAP00000022747 | umps | ENSKMAP00000022747 | ENSKMAP00000022914 | Golgi transport 1A. | Uridine monophosphate synthetase. | 0.965 |
GOLT1B | LOC108234791 | ENSKMAP00000015064 | ENSKMAP00000005018 | Golgi transport 1B. | Cytochrome b5 reductase 4. | 0.669 |
GOLT1B | LOC108237431 | ENSKMAP00000015064 | ENSKMAP00000029551 | Golgi transport 1B. | Zgc:110789. | 0.673 |
GOLT1B | TYMP | ENSKMAP00000015064 | ENSKMAP00000025667 | Golgi transport 1B. | Thymidine phosphorylase; Catalyzes the reversible phosphorolysis of thymidine. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis. Belongs to the thymidine/pyrimidine-nucleoside phosphorylase family. | 0.454 |
GOLT1B | dhodh | ENSKMAP00000015064 | ENSKMAP00000002131 | Golgi transport 1B. | Dihydroorotate dehydrogenase (quinone), mitochondrial; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | 0.900 |
GOLT1B | dpyd | ENSKMAP00000015064 | ENSKMAP00000012788 | Golgi transport 1B. | Dihydropyrimidine dehydrogenase [NADP(+)]; Involved in pyrimidine base degradation. Catalyzes the reduction of uracil and thymine; Belongs to the dihydropyrimidine dehydrogenase family. | 0.900 |
GOLT1B | gart | ENSKMAP00000015064 | ENSKMAP00000001257 | Golgi transport 1B. | Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family. | 0.800 |
GOLT1B | umps | ENSKMAP00000015064 | ENSKMAP00000022914 | Golgi transport 1B. | Uridine monophosphate synthetase. | 0.965 |
LOC108229856 | LOC108234791 | ENSKMAP00000005715 | ENSKMAP00000005018 | Golgi transport 1Bb. | Cytochrome b5 reductase 4. | 0.669 |
LOC108229856 | LOC108237431 | ENSKMAP00000005715 | ENSKMAP00000029551 | Golgi transport 1Bb. | Zgc:110789. | 0.673 |
LOC108229856 | TYMP | ENSKMAP00000005715 | ENSKMAP00000025667 | Golgi transport 1Bb. | Thymidine phosphorylase; Catalyzes the reversible phosphorolysis of thymidine. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis. Belongs to the thymidine/pyrimidine-nucleoside phosphorylase family. | 0.454 |
LOC108229856 | dhodh | ENSKMAP00000005715 | ENSKMAP00000002131 | Golgi transport 1Bb. | Dihydroorotate dehydrogenase (quinone), mitochondrial; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | 0.900 |
LOC108229856 | dpyd | ENSKMAP00000005715 | ENSKMAP00000012788 | Golgi transport 1Bb. | Dihydropyrimidine dehydrogenase [NADP(+)]; Involved in pyrimidine base degradation. Catalyzes the reduction of uracil and thymine; Belongs to the dihydropyrimidine dehydrogenase family. | 0.900 |
LOC108229856 | gart | ENSKMAP00000005715 | ENSKMAP00000001257 | Golgi transport 1Bb. | Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family. | 0.800 |
page 1 of 5