STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108233466Uncharacterized protein. (377 aa)    
Predicted Functional Partners:
tpm3
Uncharacterized protein; Belongs to the tropomyosin family.
   
 0.953
LOC108242564
Tropomyosin 2 (beta); Belongs to the tropomyosin family.
   
 0.953
TPM1
Uncharacterized protein; Belongs to the tropomyosin family.
   
 0.953
LOC108237348
Uncharacterized protein; Belongs to the tropomyosin family.
   
 0.953
LOC108232925
Tropomyosin 4; Belongs to the tropomyosin family.
   
 0.953
tpm4
Tropomyosin 4a; Belongs to the tropomyosin family.
   
 0.953
LOC108251423
Myosin, heavy chain 6, cardiac muscle, alpha; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.937
MYL2
Myosin light chain 2.
   
 0.936
LOC108241640
Myosin, light chain 13.
   
 0.935
ENSKMAP00000021311
Uncharacterized protein.
   
 0.935
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
Server load: low (22%) [HD]