STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108230797Xenotropic and polytropic retrovirus receptor 1a. (693 aa)    
Predicted Functional Partners:
gpcpd1
Glycerophosphocholine phosphodiesterase 1.
      
 0.483
mylip
Myosin regulatory light chain interacting protein a.
    
 
 0.416
abcg5
ATP-binding cassette, sub-family G (WHITE), member 5.
   
  
 0.414
abcg8
ATP-binding cassette, sub-family G (WHITE), member 8.
   
  
 0.408
dhcr24
24-dehydrocholesterol reductase.
      
 0.405
nr1h4
Nuclear receptor subfamily 1, group H, member 4.
      
 0.403
LOC108233113
Nuclear receptor subfamily 1, group H, member 5.
      
 0.403
LOC108249685
Kinase D-interacting substrate 220b.
   
 
 0.401
LOC108234850
ANK_REP_REGION domain-containing protein.
   
 
 0.401
nkpd1
NTPase, KAP family P-loop domain containing 1.
   
 
 0.401
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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