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NAC001 protein (Arabidopsis thaliana) - STRING interaction network
"NAC001" - NAC domain containing protein 1 in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
NAC001NAC domain containing protein 1; Transcriptional activator activated by proteolytic cleavage through regulated intramembrane proteolysis (RIP) (429 aa)    
Predicted Functional Partners:
AT5G26600
Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; May catalyze the production of hydrogen sulfide (H2S) from cysteine (475 aa)
           
  0.922
ARV1
ARV1 family protein; ARV1; Contains the following InterPro domains- Arv1-like protein (InterPro-IPR007290); BEST Arabidopsis thaliana protein match is- Arv1-like protein (TAIR-AT4G01510.1); Has 311 Blast hits to 311 proteins in 154 species- Archae - 0; Bacteria - 0; Metazoa - 110; Fungi - 115; Plants - 42; Viruses - 0; Other Eukaryotes - 44 (source- NCBI BLink) (245 aa)
           
  0.917
CPuORF8
Upstream open reading frames (uORFs) are small open reading frames found in the 5’ UTR of a mature mRNA, and can potentially mediate translational regulation of the largest, or major, ORF (mORF). CPuORF8 represents a conserved upstream opening reading frame relative to major ORF AT1G06150.1 (34 aa)
           
  0.865
RNS1
Member of the ribonuclease T2 family, responds to inorganic phosphate starvation, and inhibits production of anthocyanin. Also involved in wound-induced signaling independent of jasmonic acid (230 aa)
       
 
  0.771
AT3G10260
Reticulon-like protein B8; Reticulon family protein; Contains the following InterPro domains- Reticulon (InterPro-IPR003388); BEST Arabidopsis thaliana protein match is- Reticulon family protein (TAIR-AT3G61560.1); Has 1060 Blast hits to 1060 proteins in 78 species- Archae - 0; Bacteria - 0; Metazoa - 591; Fungi - 0; Plants - 458; Viruses - 0; Other Eukaryotes - 11 (source- NCBI BLink) (267 aa)
       
      0.762
AT1G17080
Ribosomal protein L18ae family; BEST Arabidopsis thaliana protein match is- Ribosomal protein L18ae family (TAIR-AT1G53560.1); Has 119 Blast hits to 119 proteins in 14 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 119; Viruses - 0; Other Eukaryotes - 0 (source- NCBI BLink) (154 aa)
       
      0.762
ERG28
Homolog of yeast ergosterol28 (ERG28); Involved in biological_process unknown; Located in endomembrane system, integral to membrane; Expressed in 22 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- Erg28-like (InterPro-IPR005352); Has 223 Blast hits to 223 proteins in 105 species- Archae - 0; Bacteria - 0; Metazoa - 67; Fungi - 94; Plants - 48; Viruses - 0; Other Eukaryotes - 14 (source- NCBI BLink) (129 aa)
       
      0.762
AT1G18340
RNA polymerase II transcription factor B subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core, which is essential for both basal and activated transcription, and is involved in nucleotide excision repair (NER) of damaged DNA (301 aa)
           
  0.624
NTL
NTF2-like (NTL); Its function is described as protein transporter activity; Involved in transport, protein import into nucleus; Located in nucleus, intracellular; Expressed in leaf whorl, sperm cell, flower, pedicel; Expressed during 4 anthesis; Contains the following InterPro domains- Nuclear transport factor 2 (InterPro-IPR002075), Nuclear transport factor 2, Eukaryote (InterPro-IPR018222); BEST Arabidopsis thaliana protein match is- nuclear transport factor 2B (TAIR-AT1G27970.1); Has 1082 Blast hits to 1082 proteins in 220 species- Archae - 0; Bacteria - 0; Metazoa - 586; Fungi - 19 [...] (132 aa)
           
  0.624
EMB1444
Basic helix-loop-helix (bHLH) DNA-binding superfamily protein; Transcription factor that may regulate root development (1322 aa)
           
  0.624
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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