• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
AT1G01300 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G01300" - Eukaryotic aspartyl protease family protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G01300Eukaryotic aspartyl protease family protein; Aspartyl protease. Not able to cleave BAG6 (485 aa)    
Predicted Functional Partners:
AT1G01305
Unknown protein; Its function is described as molecular_function unknown; Involved in biological_process unknown; Located in endomembrane system; Has 30201 Blast hits to 17322 proteins in 780 species- Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source- NCBI BLink) (141 aa)
           
  0.930
AT1G01310
At1g01310; CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein; Its function is described as molecular_function unknown; Involved in biological_process unknown; Located in extracellular region; Expressed in 6 plant structures; Expressed during L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; Contains the following InterPro domains- Allergen V5/Tpx-1 related, conserved site (InterPro-IPR018244), Allergen V5/Tpx-1 related (InterPro-IPR001283), Ves allergen (InterPro-IPR002413), S [...] (241 aa)
           
  0.835
AT5G47510
Phosphatidylinositol/phosphatidylcholine transfer protein SFH11; Required for transport of secretory proteins from the Golgi complex. Catalyzes the transfer of phosphatidylinositol and phosphatidylcholine between membranes in vitro (By similarity) (376 aa)
           
  0.832
AT5G19100
Extracellular dermal glycoprotein-like protein/EDGP-like; Eukaryotic aspartyl protease family protein; Its function is described as aspartic-type endopeptidase activity; Involved in proteolysis; Located in endomembrane system; Expressed in root; Contains the following InterPro domains- Peptidase aspartic (InterPro-IPR021109), Peptidase aspartic, catalytic (InterPro-IPR009007), Peptidase A1 (InterPro-IPR001461); BEST Arabidopsis thaliana protein match is- Eukaryotic aspartyl protease family protein (TAIR-AT1G03220.1); Has 1807 Blast hits to 1807 proteins in 277 species- Archae - 0; Bact [...] (391 aa)
           
  0.832
AT4G04460
Saposin-like aspartyl protease family protein; Involved in the processing and degradation of storage proteins; Belongs to the peptidase A1 family (508 aa)
           
  0.811
AT4G22050
Eukaryotic aspartyl protease family protein; Its function is described as aspartic-type endopeptidase activity; Involved in proteolysis; Located in endomembrane system; Expressed in 6 plant structures; Expressed during LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage; Contains the following InterPro domains- Peptidase aspartic (InterPro-IPR021109), Peptidase aspartic, catalytic (InterPro-IPR009007), Peptidase A1 (InterPro-IPR001461), Peptidase aspartic, active site (InterPro-IPR001969); BEST Arabidopsis thaliana protein match is- Eukary [...] (354 aa)
           
  0.769
RDUF2
Zinc finger (C3HC4-type RING finger) family protein; E3 ubiquitin-protein ligase involved in the positive regulation of abscisic acid-dependent drought stress responses. Possesses E3 ubiquitin ligase activity in vitro (407 aa)
           
  0.710
AT1G62290
Saposin-like aspartyl protease family protein; Involved in the breakdown of propeptides of storage proteins in protein-storage vacuoles (513 aa)
           
  0.693
AT2G24205
Encodes a ECA1 gametogenesis related family protein (114 aa)
           
  0.642
AT4G14276
Encodes a defensin-like (DEFL) family protein (94 aa)
           
  0.614
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
Server load: low (9%) [HD]