STRINGSTRING
AT1G01300 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G01300" - Aspartyl protease-like protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G01300Aspartyl protease-like protein; Aspartyl protease. Not able to cleave BAG6 (485 aa)    
Predicted Functional Partners:
AT5G46730
Glycine-rich protein (290 aa)
           
  0.867
AT4G01985
Uncharacterized protein (579 aa)
           
  0.867
AT1G01310
Allergen V5/Tpx-1-related family protein (241 aa)
     
   
  0.861
AT1G01305
Uncharacterized protein (141 aa)
     
   
  0.861
AT5G49440
Uncharacterized protein (181 aa)
           
  0.841
AT2G24205
ECA1 gametogenesis related family protein (114 aa)
           
  0.840
AT5G35405
Uncharacterized protein (149 aa)
           
  0.818
AT5G27238
Self-incompatibility S1 family protein (135 aa)
           
  0.818
AT4G14276
Defensin-like protein 21 (94 aa)
           
  0.818
AT4G08025
Uncharacterized protein (115 aa)
           
  0.818
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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