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AT1G02040 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G02040" - C2H2-type zinc finger protein in Arabidopsis thaliana
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G02040C2H2-type zinc finger protein (324 aa)    
Predicted Functional Partners:
AT2G20050
Protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein (1094 aa)
     
  0.971
LBD2
LOB domain-containing protein 2 (206 aa)
     
   
  0.969
MYB80
Myb domain protein 103 (320 aa)
     
  0.883
AT1G04880
HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain; Binds preferentially DNA with A/T-rich content (448 aa)
     
  0.809
AT3G13350
HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain; Binds preferentially DNA with A/T-rich content (319 aa)
       
  0.742
AT1G76110
HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain; Binds preferentially DNA with A/T-rich content (PubMed-19053246). Required for karyogamy during female gametophyte development, when the two polar nuclei fuse to form the diploid central cell nucleus (PubMed-16698901) (338 aa)
       
  0.742
AT1G55650
HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain; Binds preferentially DNA with A/T-rich content (337 aa)
       
  0.742
AT2G40860
Putative protein phosphatase 2C 31 (658 aa)
     
  0.710
HSL2
HAESA-like 2; Receptor-like serine/threonine-kinase acting on substrates that controls floral organ abscission. Regulated by the ’INFLORESCENCE DEFICIENT IN ABSCISSION’ (IDA) family of ligands (993 aa)
     
  0.700
MPA24.5
BARELY ANY MERISTEM 1; Necessary for male gametophyte development, as well as ovule specification and function. Involved in cell-cell communication process required during early anther development, and regulating cell division and differentiation to organize cell layers. Required for the development of high-ordered vascular strands within the leaf and a correlated control of leaf shape, size and symmetry. May regulate the CLV1-dependent CLV3-mediated signaling in meristems maintenance (1003 aa)
     
  0.700
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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