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AT1G02040 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G02040" - C2H2-type zinc finger family protein in Arabidopsis thaliana
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
protein homology
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Gene Fusion
AT1G02040C2H2-type zinc finger family protein; Its function is described as sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; Located in intracellular; Contains the following InterPro domains- Zinc finger, C2H2-like (InterPro-IPR015880), Zinc finger, C2H2-type (InterPro-IPR007087); BEST Arabidopsis thaliana protein match is- C2H2-like zinc finger protein (TAIR-AT2G17180.1); Has 5502 Blast hits to 3522 proteins in 286 species- Archae - 2; Bacteria - 120; Metazoa - 2284; Fungi - 460; Plants - 1034; Viruses - 242; Other Eukaryotes - 1360 (source- [...] (324 aa)    
Predicted Functional Partners:
LOB domain-containing protein 2 (LBD2); Involved in biological_process unknown; Located in chloroplast; Contains the following InterPro domains- Lateral organ boundaries, LOB (InterPro-IPR004883); BEST Arabidopsis thaliana protein match is- Lateral organ boundaries (LOB) domain family protein (TAIR-AT1G65620.4); Has 899 Blast hits to 894 proteins in 25 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 888; Viruses - 0; Other Eukaryotes - 11 (source- NCBI BLink) (206 aa)
Protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein; Protein serine/threonine phosphatases;protein kinases;catalytics;cAMP-dependent protein kinase regulators;ATP binding;protein serine/threonine phosphatases; Its function is described as cAMP-dependent protein kinase regulator activity, protein kinase activity, protein serine/threonine phosphatase activity, catalytic activity, ATP binding; Involved in protein amino acid phosphorylation, protein amino acid dephosphorylation, N-terminal protein myristoylation, regulation of protein amino acid phosphoryl [...] (1094 aa)
Transcription factor MYB80; Transcription factor that binds to the DNA sequence 5’- CCAACC-3’. Regulates directly PME5, UND and GLOX1. Essential for tapetum development in anthers and microsporogenesis. Regulates the timing of tapetal programmed cell death (PCD) which is critical for pollen development. May act through the activation of UND, encoding an A1 aspartic protease. Required for anther development by regulating tapetum development, callose dissolution and exine formation. Acts upstream of A6 and FAR2/MS2, two genes required for pollen exine formation. Negatively regulates tric [...] (320 aa)
Encodes a protein similar to the transcriptional regular of the animal Polycomb group and is involved in regulation of establishment of anterior-posterior polar axis in the endosperm and repression of flowering during vegetative phase. Mutation leads endosperm to develop in the absence of fertilization and flowers to form in seedlings and non-reproductive organs. Also exhibits maternal effect gametophytic lethal phenotype, which is suppressed by hypomethylation. Forms part of a large protein complex that can include VRN2 (VERNALIZATION 2), VIN3 (VERNALIZATION INSENSITIVE 3) and polyco [...] (369 aa)
Duplicated homeodomain-like superfamily protein; Encodes a protein with a putative role in mRNA splicing (1656 aa)
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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