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RAB28 protein (Arabidopsis thaliana) - STRING interaction network
"RAB28" - Responsive to abscisic acid 28 in Arabidopsis thaliana
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAB28Responsive to abscisic acid 28; LEA proteins are late embryonic proteins abundant in higher plant seed embryos. The function of those proteins is not known (182 aa)    
Predicted Functional Partners:
SWEET7
Nodulin MtN3-like protein; Mediates both low-affinity uptake and efflux of sugar across the plasma membrane (258 aa)
           
  0.600
AT1G54730
Sugar transporter ERD6-like 5; Sugar transporter (470 aa)
           
  0.600
AT1G25390
Protein kinase-like protein (629 aa)
           
  0.595
AtLEA4-1
Late Embryogenesis Abundant 4-1 (134 aa)
     
   
  0.577
ERF1-3
Eukaryotic release factor 1-3; Directs the termination of nascent peptide synthesis (translation) in response to the termination codons UAA, UAG and UGA (PubMed-15474304). Modulates plant growth and development (PubMed-16113224) (435 aa)
           
  0.491
PKp3
Plastidial pyruvate kinase 3; Required for plastidial pyruvate kinase activity (571 aa)
           
  0.491
AT5G49500
Signal recognition particle SRP54 subunit protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein) (497 aa)
           
  0.473
LAP1
Leucyl aminopeptidase 1; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides (520 aa)
           
  0.450
PPI1
Proton pump interactor 1; Promotes AHA1 plasma membrane ATPase activity by binding to a site different from the 14-3-3 binding site (612 aa)
           
  0.449
AT3G01520
Universal stress protein A-like protein (175 aa)
           
  0.449
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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