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AT1G05710 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G05710" - Basic helix-loop-helix domain-containing protein in Arabidopsis thaliana
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G05710Basic helix-loop-helix domain-containing protein (171 aa)    
Predicted Functional Partners:
AT4G32800
Ethylene-responsive transcription factor ERF043; Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity) (221 aa)
           
  0.633
TCP14
Transcription factor TCP14 (489 aa)
       
      0.588
PTF1
Transcription factor TCP13; Plays a pivotal role in the control of morphogenesis of shoot organs by negatively regulating the expression of boundary- specific genes such as CUC genes, probably through the induction of miRNA (e.g. miR164). Binds to the 3’-ACC-5’ repeats in the light-responsive promoter (LRP) of psbD, and activates its transcription. Participates in ovule develpment (PubMed-25378179) (355 aa)
       
      0.588
RGF8
Uncharacterized protein; May be involved in maintaining the postembryonic root stem cell niche (123 aa)
     
   
  0.577
PUB25
Plant U-box 25; Functions as an E3 ubiquitin ligase (421 aa)
           
  0.559
AT3G09870
SAUR-like auxin-responsive protein (113 aa)
           
  0.559
AT3G45830
Uncharacterized protein (1298 aa)
           
  0.502
AT4G18340
Glycosyl hydrolase family 17 protein (397 aa)
           
  0.499
AT3G60690
SAUR-like auxin-responsive protein (170 aa)
           
  0.499
AT2G43890
Pectin lyase-like superfamily protein (392 aa)
           
  0.471
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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